- Yudiati, E., Isnansetyo, A., Murwantoko, Ayuningtyas, Triyanto & Handayani, C.R. (2016). Innate Immune-Stimulating and Immune genes Up-Regulating Activities of Three Types of Alginate from Sargassum siliquosum in Pacific White Shrimp, Litopenaeus vannamei. Fish & Shellfish Immunology, 54, 46-53.
- Isnansetyo, A., Fikriyah, A., Kasanah, N. & Murwantoko. (2016). Non-Specific Immune Potentiating Activity of Fucoidan from Tropical Brown Algae (Phaeophyceace), Sargassum cristaefolium in Tilapia (Oreochromis niloticus).Aquaculture International, 24(2), 465-477.
- Gudkovs, N., Murwantoko & Walker, P.J. (2014). Stability of The WSSV ORF94 VNTR Genotype Marker During Passage in Marine Shrimp, Freshwater Crayfish and Freshwater Prawns. Diseases of Aquatic Organisms, 111(3), 249-257.
- Murwantoko, Rozi, Istiqomah, I. & Nitimulyo, K.H. (2013). Isolation, Characterization, and Pathogenecity of Pathogenic Bacteria on Gouramy (Osphronemus goramy)from Bantul Regency. J Fish. Sci., 15(2), 83-90.
- Murwantoko, Setyowati, D.N. & Pratiwi, R. (2012). Cloning and Expression of ORF124 Koi herpesvirus As a Vaccine Candidate. Indonesian J of Biotechnology, 17(1), 42-50.
- Murwantoko. (2011). Isolation and Identification of Emerstin Form Emericella nidulans and Investigation of Its Anticancer Properties. Microbiology Indonesia, 5.
- Prayogo, N.A., Wijayanti, G.E., Murwantoko, Kawaichi, M. & Astuti, P. (2011). Structure and Phylogenetic of GnRH Genes of Hard-Lipped Barb (Osteochilus hasselti C.V).Middle-east J Sci. Res., 10(3), 332-341.
- Murwantoko. (2011). Cloning and Sequence Analysis of Genes Encoding the Outer Membrane Protein from Vibrio. Aquacultura Indonesiana, 12, 13-19.
- Nursid, M., Chasanah, E., Murwantoko & Wahyuono, S. (2011). Screening of Marine Fungi Producing Cytotoxic Compound from IndonesianWaters. J Pascapanen & Biotek. Kel. & Perik, 6(1), 45-56.
- Murwantoko, Handayani, C.R. & Pratiwi, R. (2009). Cloning and Sequence Analysis of Capsid Protein Gene of Iridovirus Indonesian Isolates. Indonesian J of Biotechnology, 14(1), 1117-1123.
- Rahayu, N.S., Susanti, D., Lantiani, D., Wibowo, S.A., Diana, R. & Murwantoko. (2009). The Effect of Salinity on Decreasing Parasites on Gouramy, Osphronemus goramy. J Fish. Sci., 11(2), 175-182.
- Murwantoko, Triyanto & Pamungkas, D.A. (2010). Development of Loop-Mediated Isothermal Amplification of DNA Method and Its Application to Detect Koi herpesvirus in Fishes. J Fish. Sci., 12(2), 51-56.
- Cloning ORF2 Membrane Protein of Koi herpesvirus Lake Toba, Indonesian Isolate. Hayati J of Biosciences, 16(2), 49-53.
- Murwantoko & Hardaningsih. (2008). Genetic Variation of Gouramy (Osphronemus goramy, Lac.) Using rDNA Sequence Approach .Aquacultura Indonesiana. 9(3), 125-134.
- Murwantoko, Widada, J. & Nuraini, Y.L. (2008). Cloning and Sequence Analysis of Coat Protein Gene of Betanodavirus, the Causative Agent of Viral Nervous Necrosis of Grouper.Indonesian J of Biotechnology, 13(1), 1048-1054.
- Murwantoko, Yano, M., Ueta, Y., Murasaki, A., Kanda, H., Oka, C. & Kawaichi, M. (2004). Binding of Proteins to The PDZ Domain Regulates Proteolytic Activity of HtrA1 Serine Protease. Biochemical J. 381, 895-904.